Comments - millisecond part is trimmed away when saving Java Date obj by hibernate
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In case official Connector/J still does not support fractional seconds, and you're comfortable with compiling connector from source, we have a repository based on Connector/J 5.1.15 with microsecond support.
(don't be confused by "5.1.5", it is a wrong label, repo is a based on 5.1.15)